PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0065s0047.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 316aa    MW: 35659.9 Da    PI: 5.6572
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0065s0047.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.91.4e-1448133281
             trihelix   2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                          Wt  e   L +arre+ +r ++g      k +  +W+++ ++++++g+ +s++qC++kwe l+ ++kk+++ ek+  s+++s + +
  Mapoly0065s0047.1.p  48 WTPAEMVILQAARREDFDRQNKGglkekkKTAVERWQWIEDYCWAQGVLKSAQQCQDKWELLASEFKKVNDYEKNIPSGQRSYWEM 133
                          **************999999976343333577899****************************************98888888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.5E-1246133No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MTSEEVAMAD PRAIVQVNDD QSKEIDDDVL YGDPEGSRNG RTYKKSNWTP AEMVILQAAR  60
REDFDRQNKG GLKEKKKTAV ERWQWIEDYC WAQGVLKSAQ QCQDKWELLA SEFKKVNDYE  120
KNIPSGQRSY WEMLGDERKK HRLPRNFYKE VFQALTEWYN KSKAADPGEL AVDTSTPAPI  180
LRIACSYGSD AGAGGSPDNT AGSNGEFSDS EGDDAENANG PSTLRKRKLL PKSSDRMAPI  240
LERNNKKVVD AMMESEERKD KRHKEDMEME KVKLKFEKEK FRGTMELGSG YISALNNIGE  300
GLKQLSAALQ ASRQP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223228LRKRKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001781910.11e-109predicted protein
TrEMBLA9TTI71e-109A9TTI7_PHYPA; Predicted protein
STRINGPP1S314_53V6.11e-109(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18811637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.17e-21Trihelix family protein